From: cmzmasek <cmzmasek@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Date: Sun, 19 Jan 2014 05:09:05 +0000 (+0000)
Subject: in progress
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=6a8ca715561c8359f7116c79424932a158a73e69;p=jalview.git

in progress
---

diff --git a/forester/ruby/evoruby/lib/evo/tool/phylogenies_decorator.rb b/forester/ruby/evoruby/lib/evo/tool/phylogenies_decorator.rb
index a6ba133..1eea808 100644
--- a/forester/ruby/evoruby/lib/evo/tool/phylogenies_decorator.rb
+++ b/forester/ruby/evoruby/lib/evo/tool/phylogenies_decorator.rb
@@ -200,7 +200,7 @@ module Evoruby
           end
 
           cmd = decorator +
-           ' -p -f=m ' + phylogeny_file + ' ' +
+           ' -t -p -f=m ' + phylogeny_file + ' ' +
            seqs_file_name  + ' ' + TMP_FILE_1
           puts cmd
           begin