From: amwaterhouse
The 'Modeller Output' flag in the 'Output' tab of the Jalview Preferences dialog
+ The 'Modeller Output' flag in the 'Output' tab of the Jalview Preferences dialog
box controls whether Jalview will also output MODELLER style PIR
files. In this case, any existing 'non-modeller PIR' header
information in the description string of an alignment is appended to