From: amwaterhouse <Andrew Waterhouse>
Date: Tue, 24 Oct 2006 12:36:20 +0000 (+0000)
Subject: Only send one call per sequence at the moment
X-Git-Tag: Release_2_2~238
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=6ae5fa606e41ff9e06b55d3f5f613e544ad37937;p=jalview.git

Only send one call per sequence at the moment
---

diff --git a/src/jalview/io/DasSequenceFeatureFetcher.java b/src/jalview/io/DasSequenceFeatureFetcher.java
index 305160e..21ead9c 100755
--- a/src/jalview/io/DasSequenceFeatureFetcher.java
+++ b/src/jalview/io/DasSequenceFeatureFetcher.java
@@ -247,23 +247,24 @@ public class DasSequenceFeatureFetcher
           // we know the id for this entry, so don't note its ID in the unknownSequences list
          // for (int j = 0; j < uprefs.length; j++)
           {
-
-            // Will have to pass any mapping information to the fetcher - the start/end for the DBRefEntry may not be the same as the sequence's start/end
+            // Will have to pass any mapping information to the fetcher
+            //- the start/end for the DBRefEntry may not be the same as the sequence's start/end
             DasCoordinateSystem cs[] = dasSource.getCoordinateSystem();
-           // if(cs.length>0)
-             // System.out.println("err "+
-            for (int l = 0; l < cs.length; l++)
+            if(cs.length>0)
             {
-              if (jalview.util.DBRefUtils.isDasCoordinateSystem(cs[l].
-                  getName(), uprefs[0]))
+             // for (int l = 0; l < cs.length; l++)
               {
-
-                Cache.log.debug("Launched fetcher for coordinate system " +
-                                   cs[l].getName());
-
-                createFeatureFetcher(seq,
-                                     dasSource,
-                                     uprefs[0].getAccessionId());
+               //
+               if (jalview.util.DBRefUtils
+                    .isDasCoordinateSystem(cs[0].getName(), uprefs[0]))
+                {
+                  Cache.log.debug("Launched fetcher for coordinate system " +
+                                  cs[0].getName());
+
+                  createFeatureFetcher(seq,
+                                       dasSource,
+                                       uprefs[0].getAccessionId());
+                }
               }
             }
           }