From: cmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Date: Sun, 4 Mar 2012 00:08:45 +0000 (+0000)
Subject: in progress
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=6b493d05b909709c4e5afb9c5d24edefcfbca1f2;p=jalview.git

in progress
---

diff --git a/forester/ruby/evoruby/lib/evo/apps/multi_sequence_extractor.rb b/forester/ruby/evoruby/lib/evo/apps/multi_sequence_extractor.rb
index 7f9ffe8..e56decb 100644
--- a/forester/ruby/evoruby/lib/evo/apps/multi_sequence_extractor.rb
+++ b/forester/ruby/evoruby/lib/evo/apps/multi_sequence_extractor.rb
@@ -206,6 +206,9 @@ module Evoruby
                             Util.fatal_error( PRG_NAME, "unexpected format: " + line )
                         end
                         species = values[ 0 ]
+                        if species == "BRADI" || species == "ASPNG" || species == "SCLSC" || species == "PTEVA"
+                          next
+                        end
                         seq_name = values[ 1 ]
                         if ( species != current_species )
                             current_species = species