From: Jim Procter <jprocter@issues.jalview.org>
Date: Wed, 20 Apr 2016 10:56:57 +0000 (+0100)
Subject: fix for JAL-2072
X-Git-Tag: Release_2_10_0~249^2~7^2~4
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=6e03093cc1fa546cb12cebcd2df4a7004c81b928;p=jalview.git

fix for JAL-2072
---

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index cb769bb..28ff0a1 100644
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -4124,7 +4124,9 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
       {
         JMenuItem tm = new JMenuItem();
         ScoreModelI sm = ResidueProperties.scoreMatrices.get(pwtype);
-        if (sm.isProtein() == !viewport.getAlignment().isNucleotide())
+        if (sm.isDNA() == viewport.getAlignment().isNucleotide()
+                || sm.isProtein() == !viewport.getAlignment()
+                        .isNucleotide())
         {
           String smn = MessageManager.getStringOrReturn(
                   "label.score_model_", sm.getName());