From: Jim Procter <j.procter@dundee.ac.uk>
Date: Tue, 27 Jul 2021 13:25:34 +0000 (+0100)
Subject: JAL-3855 suppress NPE when trying to retrieve SIFTS mappings for Alphafold PDB IDs
X-Git-Tag: Release_2_11_2_0~39^2~36^2~1
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=70fe8676dea464be0ae474df0c7afa8044af67a6;p=jalview.git

JAL-3855 suppress NPE when trying to retrieve SIFTS mappings for Alphafold PDB IDs
---

diff --git a/src/jalview/structure/StructureSelectionManager.java b/src/jalview/structure/StructureSelectionManager.java
index 53644e9..9fcb336 100644
--- a/src/jalview/structure/StructureSelectionManager.java
+++ b/src/jalview/structure/StructureSelectionManager.java
@@ -410,7 +410,7 @@ public class StructureSelectionManager
         registerPDBFile(pdb.getId().trim(), pdbFile);
       }
       // if PDBId is unavailable then skip SIFTS mapping execution path
-      isMapUsingSIFTs = isMapUsingSIFTs && pdb.isPPDBIdAvailable();
+      isMapUsingSIFTs = isMapUsingSIFTs && pdb.isPPDBIdAvailable() && !pdb.getId().startsWith("AF-");
 
     } catch (Exception ex)
     {