From: cmzmasek@gmail.com Date: Fri, 7 Mar 2014 23:50:22 +0000 (+0000) Subject: temp X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=710b59986bb773980a5c51957e00a1873799334c;p=jalview.git temp --- diff --git a/forester/test_data/temp.txt b/forester/test_data/temp.txt new file mode 100644 index 0000000..1993c20 --- /dev/null +++ b/forester/test_data/temp.txt @@ -0,0 +1,65 @@ + +1.69 0.00 1.52 1.48 1.45 1.44 1.46 1.69=0 +1.72 1.52 0.00 0.71 0.60 0.62 0.56 1.52=1 1.72=0 +1.66 1.48 0.71 0.00 0.46 0.51 0.47 0.71=2 1.48=1 1.66=0 +1.52 1.45 0.60 0.46 0.00 0.35 0.31 0.46=3 0.60=2 1.45=1 1.52=0 +1.60 1.44 0.62 0.51 0.35 0.00 0.27 0.35=4 0.51=3 0.62=2 1.44=1 1.60=0 +1.59 1.46 0.56 0.47 0.31 0.27 0.00 0.27=5 0.31=4 0.47=3 0.56=2 1.46=1 1.59=0 +N=7 + +1.69 0.00 1.52 1.48 1.45 1.44 1.46 1.69=0 +1.72 1.52 0.00 0.71 0.60 0.62 0.56 1.52=1 1.72=0 +1.66 1.48 0.71 0.00 0.46 0.51 0.47 0.71=2 1.48=1 1.66=0 +1.52 1.45 0.60 0.46 0.00 0.35 0.31 0.46=3 0.60=2 1.45=1 1.52=0 +1.60 1.44 0.62 0.51 0.35 0.00 0.27 0.35=4 0.51=3 0.62=2 1.44=1 1.60=0 +1.59 1.46 0.56 0.47 0.31 0.27 0.00 0.27=5 0.31=4 0.47=3 0.56=2 1.46=1 1.59=0 + +0 1 => -2.08 (1.69) +Node Bovine joins Mouse +------------------------------------------------------------- + +N=6 + +0.78 0.00 0.71 0.60 0.62 0.56 1.52=1 1.72=0 +0.73 0.71 0.00 0.46 0.51 0.47 0.71=2 1.48=1 1.66=0 +0.64 0.60 0.46 0.00 0.35 0.31 0.46=3 0.60=2 1.45=1 1.52=0 +0.68 0.62 0.51 0.35 0.00 0.27 0.35=4 0.51=3 0.62=2 1.44=1 1.60=0 +0.68 0.56 0.47 0.31 0.27 0.00 0.27=5 0.31=4 0.47=3 0.56=2 1.46=1 1.59=0 + +0 1 => -0.91 (0.78) +Node 7 (Bovine+Mouse) joins Gibbon +------------------------------------------------------------- + +N=5 + +0.33 0.00 0.46 0.51 0.47 0.71=2 1.48=1 1.66=0 +0.23 0.46 0.00 0.35 0.31 0.46=3 0.60=2 1.45=1 1.52=0 +0.26 0.51 0.35 0.00 0.27 0.35=4 0.51=3 0.62=2 1.44=1 1.60=0 +0.23 0.47 0.31 0.27 0.00 0.27=5 0.31=4 0.47=3 0.56=2 1.46=1 1.59=0 + +3 4 => -0.62 (0.27) +Node Chimp joins Human +------------------------------------------------------------- + +N=4 + +0.33 0.00 0.46 0.51 0.71=2 1.48=1 1.66=0 +0.23 0.46 0.00 0.35 0.46=3 0.60=2 1.45=1 1.52=0 +0.11 0.35 0.19 0.00 0.35=4 0.51=3 0.62=2 1.44=1 1.60=0 + +0 1 => -0.58 (0.33) +Node 8 (7+Gibbon) joins Orang +------------------------------------------------------------- + +N=3 + +0.18 0.00 0.35 0.46=3 0.60=2 1.45=1 1.52=0 +0.07 0.19 0.00 0.35=4 0.51=3 0.62=2 1.44=1 1.60=0 + +0 2 => -0.44 (0.07) +Node 10 (8+Orang) joins 9 (Chimp+Human) +------------------------------------------------------------- + +Node 11 (10+9) joins Gorilla + +