From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Wed, 23 Aug 2017 10:48:20 +0000 (+0100)
Subject: JAL-2481 a smidgin more test coverage of findFeatures
X-Git-Tag: Release_2_10_3b1~146
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=71827ba619fa1c06b2d5dd327f2cd204588867e6;p=jalview.git

JAL-2481 a smidgin more test coverage of findFeatures
---

diff --git a/test/jalview/datamodel/SequenceTest.java b/test/jalview/datamodel/SequenceTest.java
index 2f824ca..6844072 100644
--- a/test/jalview/datamodel/SequenceTest.java
+++ b/test/jalview/datamodel/SequenceTest.java
@@ -1358,6 +1358,10 @@ public class SequenceTest
     SequenceFeature sfContactFG = new SequenceFeature("Disulfide Bond",
             "desc", 13, 14, 2f, null);
     sq.addSequenceFeature(sfContactFG);
+    // add single position feature at [I]
+    SequenceFeature sfI = new SequenceFeature("Disulfide Bond",
+            "desc", 16, 16, null);
+    sq.addSequenceFeature(sfI);
 
     // no features in columns 1-2 (-A)
     List<SequenceFeature> found = sq.findFeatures(1, 2);
@@ -1384,6 +1388,11 @@ public class SequenceTest
     // columns 10-11 (--) should find nothing
     found = sq.findFeatures(10, 11);
     assertEquals(0, found.size());
+
+    // columns 14-14 (I) should find variant feature
+    found = sq.findFeatures(14, 14);
+    assertEquals(1, found.size());
+    assertTrue(found.contains(sfI));
   }
 
   @Test(groups = { "Functional" })