From: Jim Procter <jprocter@issues.jalview.org>
Date: Fri, 23 Sep 2016 10:19:40 +0000 (+0100)
Subject: JAL-2189 JAL-1479 JAL-1491 JAL-1827 release notes
X-Git-Tag: Release_2_10_0~39^2~1
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=7680003d3f9f4e7672e9709aa3ca28c8b8f4da56;p=jalview.git

JAL-2189 JAL-1479 JAL-1491 JAL-1827 release notes
---

diff --git a/help/html/releases.html b/help/html/releases.html
index c414de1..74be08e 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -65,6 +65,7 @@
             <li><!-- JAL---></li>
             <li><!-- JAL---></li>
             <li><!-- JAL---></li>
+            <li><!-- JAL-1479 JAL-1491 -->UniProt - PDB protein structure mappings with the EMBL-EBI PDBe SIFTS database</li>
             <li><!-- JAL-2079 -->Updated download sites used for Rfam and Pfam sources to xfam.org</li>
             <li><!-- JAL-2084 -->Disabled Rfam(Full) in the sequence fetcher</li>
             <li><!-- JAL-2123 -->Show residue labels in Chimera when mousing over sequences in Jalview</li>
@@ -79,7 +80,7 @@
             <li><!-- JAL-2183 -->Double click on an entry in Jalview's database chooser opens a sequence fetcher</li>
             <li><!-- JAL-1563 -->Free-text search client for UniProt using the UniProt REST API</li>
             <li><!-- JAL-2168 -->-nonews command line parameter to prevent the news reader opening</li>
-            
+                    
              
         </ul> <em>Applet</em>
         <ul>
@@ -105,7 +106,7 @@
             <li><!-- JAL-2215, JAL-1841 -->Enabling 'Ignore Gaps' results in zero scores for all base pairs in RNA Structure Consensus</li>
             <li><!-- JAL-2174-->Extend selection with columns containing feature not working</li>
             <li><!-- JAL-2275 -->Pfam format writer puts extra space at beginning of sequence</li>            
-            
+            <li><!-- JAL-1827 -->Incomplete sequence extracted from pdb entry 3a6s </li>
             
           </ul>
           <em>Application</em>
@@ -120,7 +121,8 @@
             <li><!--  JAL-1989  -->Hide columns not mirrored in complement view in a cDNA/Protein splitframe</li>
             <li><!--  JAL-1369 -->Cannot save/restore representative sequence from project when only one sequence is represented</li>
             <li><!-- JAL-2002 -->Disabled 'Best Uniprot Coverage' option in Structure Chooser</li>
-            <li><!-- JAL-2215 -->Modifying 'Ignore Gaps' on consensus or structure consensus didn't refresh annotation panel</li>            
+            <li><!-- JAL-2215 -->Modifying 'Ignore Gaps' on consensus or structure consensus didn't refresh annotation panel</li>
+                        
             <!--  may exclude, this is an external service stability issue  JAL-1941 /> RNA 3D structure not added via DSSR service</li> -->
           </ul>
           <em>Applet</em>