From: amwaterhouse <Andrew Waterhouse>
Date: Tue, 14 Nov 2006 15:26:00 +0000 (+0000)
Subject: recalc cons for group size change
X-Git-Tag: Release_2_2~119
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=7e1e1f7d676e4fdfb5ed61cb12319b46659d9290;p=jalview.git

recalc cons for group size change
---

diff --git a/src/jalview/gui/SeqPanel.java b/src/jalview/gui/SeqPanel.java
index 8387d35..4ea3a12 100755
--- a/src/jalview/gui/SeqPanel.java
+++ b/src/jalview/gui/SeqPanel.java
@@ -1430,7 +1430,8 @@ public class SeqPanel extends JPanel implements MouseListener,
 
           if (stretchGroup.cs instanceof Blosum62ColourScheme
               || stretchGroup.cs instanceof PIDColourScheme
-              || stretchGroup.cs.conservationApplied())
+              || stretchGroup.cs.conservationApplied()
+              || stretchGroup.cs.getThreshold()>0)
             stretchGroup.recalcConservation();
 
           if (stretchGroup.cs.conservationApplied())