From: Jim Procter <jprocter@issues.jalview.org>
Date: Thu, 20 Jun 2019 16:48:08 +0000 (+0100)
Subject: JAL-3111 JAL-2962 JAL-2903 JAL-2986 release notes
X-Git-Tag: Release_2_11_0~4^2~5
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=7eaaeb63fea5b145b54aebec296e0aa3187e7082;p=jalview.git

JAL-3111 JAL-2962 JAL-2903 JAL-2986 release notes
---

diff --git a/help/help/html/releases.html b/help/help/html/releases.html
index d4cba25..b9b1b67 100755
--- a/help/help/html/releases.html
+++ b/help/help/html/releases.html
@@ -134,7 +134,7 @@ li:before {
 								<!-- JAL-1767,JAL-2647 -->Principal Components Analysis results
 								and Viewer state saved in Jalview Project
 							</li>
-							<li>'Change parameters' option removed from viewer's
+							<li><!-- JAL-2962 -->'Change parameters' option removed from viewer's
 								drop-down menus</li>
 							<li>
 								<!-- JAL-2975 -->Can use shift + arrow keys to rotate PCA image
@@ -239,6 +239,7 @@ li:before {
 						<!-- JAL-3003 -->Added remarks about transparent rendering effects
 						not supported in EPS figure export
 					</li>
+					<li><!-- JAL-2903 -->Typos in documentation for Preferences dialog</li>
 				</ul> <em>Development and Release Processes</em>
         <ul>
         	<li>
@@ -442,9 +443,14 @@ li:before {
 						<!-- JAL-868 -->Structure colours not updated when associated tree
 						repartitions the alignment view (Regression in 2.10.5)
 					</li>
-
 				</ul>
-				<em>New Known Defects</em>
+				<em>Datamodel</em>
+				<ul>
+					<li>
+						<!-- JAL-2986 -->Sequence.findIndex returns wrong value when
+						sequence's End is greater than its length
+					</li>
+				</ul> <em>New Known Defects</em>
 				<ul>
 					<li>
 						<!-- JAL-3313 -->Codon consensus logo incorrectly scaled in gapped