From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Fri, 22 Jul 2011 16:57:59 +0000 (+0100)
Subject: ensure propagation of colour change on annotation update (JAL-868)
X-Git-Tag: Release_2_7~125
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=7ed4c708007f3f21391051ed66cd6fed5ed8f32b;p=jalview.git

ensure propagation of colour change on annotation update (JAL-868)
---

diff --git a/src/jalview/appletgui/AlignmentPanel.java b/src/jalview/appletgui/AlignmentPanel.java
index ebe5785..7104355 100644
--- a/src/jalview/appletgui/AlignmentPanel.java
+++ b/src/jalview/appletgui/AlignmentPanel.java
@@ -455,7 +455,7 @@ public class AlignmentPanel extends Panel implements AdjustmentListener, Alignme
     apvscroll.addNotify();
     hscroll.addNotify();
     validate();
-    repaint();
+    paintAlignment(true);
   }
   /**
    * calculate the annotation dimensions and refresh slider values accordingly.
diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java
index d2aa6d6..a088aa3 100644
--- a/src/jalview/gui/AlignmentPanel.java
+++ b/src/jalview/gui/AlignmentPanel.java
@@ -396,7 +396,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
     }
     validateAnnotationDimensions(true);
     addNotify();
-    repaint();
+    paintAlignment(true);
   }
   /**
    * calculate the annotation dimensions and refresh slider values accordingly.