From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 30 Aug 2006 16:09:47 +0000 (+0000)
Subject: jnet file is 1 to 1 mapping
X-Git-Tag: Release_2_1_1~23
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=7f88b4e40175e3f47d35786ba1cb44d1ae79cce8;p=jalview.git

jnet file is 1 to 1 mapping
---

diff --git a/src/jalview/io/JnetAnnotationMaker.java b/src/jalview/io/JnetAnnotationMaker.java
index 60fb601..61f0ce1 100755
--- a/src/jalview/io/JnetAnnotationMaker.java
+++ b/src/jalview/io/JnetAnnotationMaker.java
@@ -111,7 +111,7 @@ public class JnetAnnotationMaker
 
         if (seqRef != null)
         {
-          annot.createSequenceMapping(seqRef, 1, false);
+          annot.createSequenceMapping(seqRef, 1, true);
           seqRef.addAlignmentAnnotation(annot);
         }