From: Jim Procter <jprocter@issues.jalview.org>
Date: Fri, 30 Oct 2015 12:08:01 +0000 (+0000)
Subject: JAL-1954 formatting
X-Git-Tag: Release_2_10_0~343^2^2~1
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=8073a17f5bbbec8cf01b8711cb5db256effcb05c;p=jalview.git

JAL-1954 formatting
---

diff --git a/test/jalview/io/PfamFormatInputTest.java b/test/jalview/io/PfamFormatInputTest.java
index 46e5af7..5dd4ecb 100644
--- a/test/jalview/io/PfamFormatInputTest.java
+++ b/test/jalview/io/PfamFormatInputTest.java
@@ -12,8 +12,8 @@ public class PfamFormatInputTest
   @Test
   public void testPfamFormatNoLimits() throws IOException
   {
-    AlignmentI al = new jalview.io.AppletFormatAdapter().readFile(
-            "ASEQ\t...--FFAFAFF--", AppletFormatAdapter.PASTE, "PFAM");
+    AlignmentI al = new jalview.io.AppletFormatAdapter().readFile("ASEQ"
+            + '\t' + "...--FFAFAFF--", AppletFormatAdapter.PASTE, "PFAM");
     Assert.assertEquals(1, al.getHeight(), "Wrong number of sequences");
     Assert.assertTrue(al.hasValidSequence(),
             "Didn't extract limits from PFAM ID");
@@ -22,9 +22,9 @@ public class PfamFormatInputTest
   @Test
   public void testPfamFormatValidLimits() throws IOException
   {
-    AlignmentI al = new jalview.io.AppletFormatAdapter()
-            .readFile("ASEQ/15-25\t...--FFAFAFF--",
-                    AppletFormatAdapter.PASTE, "PFAM");
+    AlignmentI al = new jalview.io.AppletFormatAdapter().readFile(
+            "ASEQ/15-25" + '\t' + "...--FFAFAFF--",
+            AppletFormatAdapter.PASTE, "PFAM");
     Assert.assertEquals(1, al.getHeight(), "Wrong number of sequences");
     Assert.assertTrue(al.hasValidSequence(),
             "Didn't extract limits from PFAM ID");