From: cmzmasek@gmail.com Date: Tue, 26 Jun 2012 02:07:54 +0000 (+0000) Subject: in progress X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=818a1776a9648d17e8457bef302b73cac2334d73;p=jalview.git in progress --- diff --git a/forester/test_data/gene_tree_tax_code_4.xml b/forester/test_data/gene_tree_tax_code_4.xml new file mode 100644 index 0000000..6cb6fbc --- /dev/null +++ b/forester/test_data/gene_tree_tax_code_4.xml @@ -0,0 +1,672 @@ + + + + + + + + + + + + + + + + + + + + PLAFA + + + A + + + + + PLAYO + + + A + + + + + + PLACH + + + A + + + + + + PLAYO + + + B + + + + + i have no species + + + + + Homo sapiens + + + X + + + + + + XXXXX + + + X + + + + + + 3093 + + + X + + + + + + + + + HUMAN + + + A + + + + + MOUSE + + + A + + + + + + YEAST + + + A + + + + + + + + HUMAN + + + E + + + + + YEAST + + + E + + + + + + MOUSE + + + F + + + + + + + + + NEMVE + + + C + + + + + PETMA + + + C + + + + + + + + + MYCGR + + + D + + + + + MYCGR + + + D1 + + + + + + MYCPJ + + + D + + + + + + + PYRHO + + + A + + + + + + + + + + + + + + + + PLAFA + + + A + + + + + PLAYO + + + A + + + + + + PLACH + + + A + + + + + + PLAYO + + + B + + + + + i have no species + + + + + Homo sapiens + + + X + + + + + + XXXXX + + + X + + + + + + 3093 + + + X + + + + + + + + + HUMAN + + + A + + + + + MOUSE + + + A + + + + + + YEAST + + + A + + + + + + + + HUMAN + + + E + + + + + YEAST + + + E + + + + + + MOUSE + + + F + + + + + + + + + NEMVE + + + C + + + + + PETMA + + + C + + + + + + + + + MYCGR + + + D + + + + + MYCGR + + + D1 + + + + + + MYCPJ + + + D + + + + + + + + + + + + + + + + + + PLAFA + + + A + + + + + PLAYO + + + A + + + + + + PLACH + + + A + + + + + + PLAYO + + + B + + + + + i have no species + + + + + Homo sapiens + + + X + + + + + + XXXXX + + + X + + + + + + 3093 + + + X + + + + + + + + + HUMAN + + + A + + + + + MOUSE + + + A + + + + + + YEAST + + + A + + + + + + + + HUMAN + + + E + + + + + YEAST + + + E + + + + + + MOUSE + + + F + + + + + + + + + + + + PLAFA + + + A + + + + + PLAYO + + + A + + + + + + PLACH + + + A + + + + + + PLAYO + + + B + + + + + + + NEMVE + + + C + + + + + PETMA + + + C + + + + + + + + + + MYCGR + + + D + + + + + MYCGR + + + D1 + + + + + + MYCPJ + + + D + + + + + + + + + + + + 266940 + KINRD + Kineococcus radiotolerans + + + A + + + + + 378753 + KOCRD + Kocuria rhizophila + + + A + + + + + + + MICPN + + + A + + + + + THEFY + + + A + + + + + + + STRCO + + + A + + + + + + BACTN + + + A + + + + + + \ No newline at end of file