From: amwaterhouse <Andrew Waterhouse>
Date: Thu, 18 Aug 2005 13:41:42 +0000 (+0000)
Subject: Character methods don't exist in java 1.1
X-Git-Tag: Release_2_04~50
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=83b55697263efc7b0c660eba6ea7091f6904257d;hp=0410fb5d6f4c4e346daf4bb9ad0a78f2e04b4c93;p=jalview.git

Character methods don't exist in java 1.1
---

diff --git a/src/jalview/analysis/AAFrequency.java b/src/jalview/analysis/AAFrequency.java
index 55447d3..1f6f423 100755
--- a/src/jalview/analysis/AAFrequency.java
+++ b/src/jalview/analysis/AAFrequency.java
@@ -66,7 +66,7 @@ public class AAFrequency
 
                     if (sequence.length() > i)
                     {
-                        res = Character.toString(Character.toUpperCase(sequence.charAt(i)));
+                        res = String.valueOf(Character.toUpperCase(sequence.charAt(i)));
 
                         if (jalview.util.Comparison.isGap(res.charAt(0)))
                         {
diff --git a/src/jalview/analysis/Conservation.java b/src/jalview/analysis/Conservation.java
index 0bfb636..b9b68ce 100755
--- a/src/jalview/analysis/Conservation.java
+++ b/src/jalview/analysis/Conservation.java
@@ -123,7 +123,7 @@ public class Conservation
 
                 for (j = 1; j <= len; j++)
                 {
-                    sqnum[j] = ((Integer) jalview.schemes.ResidueProperties.aaHash.get(Character.toString(
+                    sqnum[j] = ((Integer) jalview.schemes.ResidueProperties.aaHash.get(String.valueOf(
                                 sq.charAt(j - 1)))).intValue(); // yuk - JBPNote - case taken care of in aaHash
                 }
 
@@ -163,7 +163,7 @@ public class Conservation
 
                     if (sequence.length() > i)
                     {
-                        res = Character.toString(Character.toUpperCase(sequence.charAt(i)));
+                        res = String.valueOf(Character.toUpperCase(sequence.charAt(i)));
 
                         if (residueHash.containsKey(res))
                         {
diff --git a/src/jalview/schemes/Blosum62ColourScheme.java b/src/jalview/schemes/Blosum62ColourScheme.java
index 4b1bf15..5e86263 100755
--- a/src/jalview/schemes/Blosum62ColourScheme.java
+++ b/src/jalview/schemes/Blosum62ColourScheme.java
@@ -34,7 +34,7 @@ public class Blosum62ColourScheme
     char res = s.charAt(0);
     if ('a' <= res && res <= 'z' )
     {
-       s = Character.toString( res -= ('a' - 'A') );
+       s = String.valueOf( res -= ('a' - 'A') );
     }
 
 
diff --git a/src/jalview/schemes/PIDColourScheme.java b/src/jalview/schemes/PIDColourScheme.java
index 9dc4c66..3d1c18b 100755
--- a/src/jalview/schemes/PIDColourScheme.java
+++ b/src/jalview/schemes/PIDColourScheme.java
@@ -40,7 +40,7 @@ public class PIDColourScheme
     char res = s.charAt(0);
     if ('a' <= res && res <= 'z')
     {
-      s = Character.toString(res -= ('a' - 'A'));
+      s = String.valueOf(res -= ('a' - 'A'));
     }