From: amwaterhouse <Andrew Waterhouse>
Date: Mon, 10 Apr 2006 11:10:26 +0000 (+0000)
Subject: dont need to set - to -
X-Git-Tag: Release_2_08~31
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=84a41556c9b336cda459339cc6f0a0cb45ec90d2;p=jalview.git

dont need to set - to -
---

diff --git a/src/jalview/analysis/Conservation.java b/src/jalview/analysis/Conservation.java
index b914108..0aa9805 100755
--- a/src/jalview/analysis/Conservation.java
+++ b/src/jalview/analysis/Conservation.java
@@ -165,7 +165,8 @@ public class Conservation
                     {
                         c = sequence.getCharAt(i);
 
-                        if(jalview.util.Comparison.isGap(c))
+                        // No need to check if its a '-'
+                        if(c == '.' || c==' ')
                           c = '-';
 
                         if ('a' <= c && c <= 'z')