From: cmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Date: Wed, 14 May 2014 22:30:42 +0000 (+0000)
Subject: inprogress
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=87ec04c91e98be59a80d13f27080688e24bbaf1b;p=jalview.git

inprogress
---

diff --git a/forester/java/build.xml b/forester/java/build.xml
index 63e3e21..fd888c3 100644
--- a/forester/java/build.xml
+++ b/forester/java/build.xml
@@ -35,7 +35,7 @@
 
 	<target name="compile_applets_only" description="Compiles the Task" depends="clean">
 		<mkdir dir="${classes.dir}" />
-		<javac source="1.6" target="1.6" debug="false" srcdir="${src.dir}" destdir="${classes.dir}" optimize="on" verbose="false" classpath="${itextjar};${commonscodecjar}">
+		<javac source="1.6" target="1.6" debug="true" debuglevel="lines,source" srcdir="${src.dir}" destdir="${classes.dir}" optimize="on" verbose="false" classpath="${itextjar};${commonscodecjar};${openchartjar}">
 			<compilerarg value="-Xlint:deprecation" />
 		</javac> 
 	</target>
@@ -80,6 +80,7 @@
 			          org/forester/evoinference/**
 			          org/forester/go/**
 			          org/forester/go/etc/**
+			          org/forester/msa_compactor/**
 			          org/forester/pccx/**
 			          org/forester/surfacing/**
 			          org/forester/test/**