From: Jim Procter <jprocter@issues.jalview.org>
Date: Tue, 27 Oct 2020 11:02:36 +0000 (+0000)
Subject: JAL-3768 noticed failure of test when run as part of suite via gradle - whilst patchi... 
X-Git-Tag: Release_2_11_1_3~5^2~6
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=8f837cf3b099abae7482e72a8bff1bd4f5865e4b;p=jalview.git

JAL-3768 noticed failure of test when run as part of suite via gradle - whilst patching JAL-3700 JAL-3748 JAL-3763 for 2.11.1.3
---

diff --git a/test/jalview/structure/Mapping.java b/test/jalview/structure/Mapping.java
index 4bee3f5..fe8a4c6 100644
--- a/test/jalview/structure/Mapping.java
+++ b/test/jalview/structure/Mapping.java
@@ -260,6 +260,8 @@ public class Mapping
   @Test(groups = { "Functional" })
   public void compareTransferredToRefPDBAnnot() throws Exception
   {
+    // JBPNote this has failed when run on OSX via gradle clean test
+    // possible race condition ?
     StructureImportSettings.setProcessSecondaryStructure(true);
     StructureImportSettings.setVisibleChainAnnotation(true);
     StructureImportSettings.setShowSeqFeatures(true);