From: amwaterhouse <Andrew Waterhouse>
Date: Thu, 10 Feb 2005 18:12:50 +0000 (+0000)
Subject: watch end of sequence when asking for (start, end)
X-Git-Tag: Release_2_0~670
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=8fd0b8182a10ed77b078160fffccca67f7ecb118;p=jalview.git

watch end of sequence when asking for (start, end)
---

diff --git a/src/jalview/datamodel/Sequence.java b/src/jalview/datamodel/Sequence.java
index eceddf1..cf578c0 100755
--- a/src/jalview/datamodel/Sequence.java
+++ b/src/jalview/datamodel/Sequence.java
@@ -139,6 +139,8 @@ public class Sequence implements SequenceI
     return this.sequence;
   }
   public String getSequence(int start,int end) {
+    if(end>=sequence.length())
+      end = sequence.length()-1;
     return this.sequence.substring(start,end);
   }