From: Jim Procter <j.procter@dundee.ac.uk>
Date: Tue, 14 Sep 2021 16:01:57 +0000 (+0100)
Subject: JAL-3829 JAL-3855 ignore case when detecting alphafold ID
X-Git-Tag: Release_2_11_2_0~37^2^2~3
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=907ebb2a8d69a51e4f1648681dfc930a389b246c;p=jalview.git

JAL-3829 JAL-3855 ignore case when detecting alphafold ID
---

diff --git a/src/jalview/ws/dbsources/EBIAlfaFold.java b/src/jalview/ws/dbsources/EBIAlfaFold.java
index b4cb614..a93f233 100644
--- a/src/jalview/ws/dbsources/EBIAlfaFold.java
+++ b/src/jalview/ws/dbsources/EBIAlfaFold.java
@@ -82,7 +82,9 @@ public class EBIAlfaFold extends EbiFileRetrievedProxy
   @Override
   public Regex getAccessionValidator()
   {
-    return new Regex("(AF-[A-Z]+[0-9]+[A-Z0-9]+-F1)");
+    Regex validator =  new Regex("(AF-[A-Z]+[0-9]+[A-Z0-9]+-F1)");
+    validator.setIgnoreCase(true);
+    return validator;
   }
 
   /*
@@ -144,7 +146,7 @@ public class EBIAlfaFold extends EbiFileRetrievedProxy
 
     try
     {
-      File tmpFile = File.createTempFile(id, "cif");
+      File tmpFile = File.createTempFile(id, ".cif");
       UrlDownloadClient.download(alphaFoldCif, tmpFile);
       
       // may not need this check ?