From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Mon, 19 Nov 2012 21:18:21 +0000 (+0000)
Subject: bugfix
X-Git-Tag: Jalview_2_9~265^2~1
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=90c1537ec500264f2ac89d64bb75a7ce14fa0181;p=jalview.git

bugfix
---

diff --git a/src/MCview/PDBfile.java b/src/MCview/PDBfile.java
index 0ab28f6..9c30e67 100755
--- a/src/MCview/PDBfile.java
+++ b/src/MCview/PDBfile.java
@@ -244,7 +244,7 @@ public class PDBfile extends jalview.io.AlignFile
               sq.transferAnnotation(sp, aligns.get(q).getMappingFromS1(false));
               //sq.setSequenceFeatures(sp.getSequenceFeatures());
               int inspos=-1;
-              for (int ap=0;p<annotations.size();)
+              for (int ap=0;ap<annotations.size();)
               {
                 if (((AlignmentAnnotation)annotations.get(ap)).sequenceRef==sp) {
                   if (inspos==-1)