From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Wed, 4 Oct 2017 14:19:02 +0000 (+0100)
Subject: JAL-2738 fix bug of premature exit from adding attributes
X-Git-Tag: Release_2_11_0~210
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=9245b43569781ac47b6f58872c77a3bf21bcc362;p=jalview.git

JAL-2738 fix bug of premature exit from adding attributes
---

diff --git a/src/jalview/io/vcf/VCFLoader.java b/src/jalview/io/vcf/VCFLoader.java
index fd0e0d6..a3e7e5a 100644
--- a/src/jalview/io/vcf/VCFLoader.java
+++ b/src/jalview/io/vcf/VCFLoader.java
@@ -620,7 +620,7 @@ public class VCFLoader
       if (CSQ.equals(key))
       {
         addConsequences(variant, seq, sf, altAlelleIndex);
-        return;
+        continue;
       }
 
       /*