From: Jim Procter <jprocter@issues.jalview.org>
Date: Wed, 21 Sep 2016 15:39:31 +0000 (+0100)
Subject: JAL-2215 fix - trigger alignment update when ‘ignore gaps’ setting changed
X-Git-Tag: Release_2_10_0~39^2~18
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=930957c979c02fb620083ae1f972216d5f5050fa;p=jalview.git

JAL-2215 fix - trigger alignment update when ‘ignore gaps’ setting changed
---

diff --git a/src/jalview/gui/AnnotationLabels.java b/src/jalview/gui/AnnotationLabels.java
index f995c60..1a9541c 100755
--- a/src/jalview/gui/AnnotationLabels.java
+++ b/src/jalview/gui/AnnotationLabels.java
@@ -481,6 +481,7 @@ public class AnnotationLabels extends JPanel implements MouseListener,
             {
               ap.av.setIgnoreGapsConsensus(cbmi.getState(), ap);
             }
+            ap.alignmentChanged();
           }
         });
         pop.add(cbmi);