From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Thu, 31 May 2012 17:27:18 +0000 (+0100)
Subject: patch fixes JWS-35
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=94faa6031ae916e4f7f7e61494e36278adcab7e0;p=jabaws.git

patch fixes JWS-35
---

diff --git a/datamodel/compbio/data/sequence/SequenceUtil.java b/datamodel/compbio/data/sequence/SequenceUtil.java
index 6e20988..14dedf4 100644
--- a/datamodel/compbio/data/sequence/SequenceUtil.java
+++ b/datamodel/compbio/data/sequence/SequenceUtil.java
@@ -589,8 +589,8 @@ public final class SequenceUtil {
 			 */
 			HashSet<Score> scores = new HashSet<Score>();
 			scores.add(new Score(DisemblResult.COILS, coils, coilsR));
-			scores.add(new Score(DisemblResult.HOTLOOPS, hotloops, rem465R));
-			scores.add(new Score(DisemblResult.REM465, rem, loopsR));
+			scores.add(new Score(DisemblResult.REM465, rem, rem465R));
+			scores.add(new Score(DisemblResult.HOTLOOPS, hotloops, loopsR));
 			results.put(sequenceName, scores);
 
 			scansingle.close();