From: Jim Procter <jprocter@issues.jalview.org>
Date: Mon, 29 May 2017 10:01:19 +0000 (+0100)
Subject: JAL-2418 updated JABAWS server in what’s new
X-Git-Tag: Release_2_10_2~3^2~62
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=962347ea6afb8dc4efb68ebc039f1c8bf62915e0;hp=-c;p=jalview.git

JAL-2418 updated JABAWS server in what’s new
---

962347ea6afb8dc4efb68ebc039f1c8bf62915e0
diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html
index f5fcf18..3f949f8 100755
--- a/help/html/whatsNew.html
+++ b/help/html/whatsNew.html
@@ -32,7 +32,12 @@
     highlights are below.
   </p>
   <ul>
-    <li>
+    <li><strong>Update to JABAWS 2.2</strong><br />Jalview's
+      alignment, protein conservation analysis, and protein disorder and
+      RNA secondary structure prediction services are now provided by <a
+      href="http://www.compbio.dundee.ac.uk/jabaws">JABAWS 2.2</a>.
+      Several of the programs provided as services have been updated, so
+      their options and parameters have changed.</li>
     <li>New preferences for <a href="webServices/urllinks.html">opening
         web pages for database cross-references</a> via the UK Elixir's
       EMBL-EBI's MIRIAM database and identifiers.org services.
@@ -41,16 +46,17 @@
   <p>
     <strong><a name="experimental">Experimental Features</a></strong>
   </p>
-  <p>This release of Jalview includes a new option in the Jalview Desktop
-  that allows you to try out features that are still in development. To
-  access the features described below, please first enable the
-  <strong>Tools&#8594;Enable Experimental Features</strong> option, and then restart Jalview.
+  <p>
+    This release of Jalview includes a new option in the Jalview Desktop
+    that allows you to try out features that are still in development.
+    To access the features described below, please first enable the <strong>Tools&#8594;Enable
+      Experimental Features</strong> option, and then restart Jalview.
   </p>
   <ul>
     <li><em>Annotation transfer between Chimera and Jalview</em><br />Two
-      <a href="features/chimera.html#experimental">new entries in the Chimera viewer's Chimera menu</a> allow positional
-      annotation to be exchanged between Chimera and Jalview.
-      </li>
+      <a href="features/chimera.html#experimental">new entries in
+        the Chimera viewer's Chimera menu</a> allow positional annotation to
+      be exchanged between Chimera and Jalview.</li>
   </ul>
 </body>
 </html>