From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Tue, 4 Sep 2012 08:57:19 +0000 (+0100)
Subject: off by one for sequence associated annotation
X-Git-Tag: Jalview_2_9~343
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=968bc59842cfb502e5e9cc4503efe27b4b4412b2;p=jalview.git

off by one for sequence associated annotation
---

diff --git a/src/jalview/ws/jws2/AADisorderClient.java b/src/jalview/ws/jws2/AADisorderClient.java
index a5bb92d..e971746 100644
--- a/src/jalview/ws/jws2/AADisorderClient.java
+++ b/src/jalview/ws/jws2/AADisorderClient.java
@@ -215,7 +215,7 @@ public class AADisorderClient extends JabawsAlignCalcWorker implements
             AlignmentAnnotation annot = createAnnotationRowsForScores(
                     ourAnnot, service.serviceType + " (" + scr.getMethod()
                             + ")", service.getServiceTypeURI()+"/"+ scr.getMethod(), aseq,
-                    base, scr);
+                    base+1, scr);
             annot.graph = AlignmentAnnotation.LINE_GRAPH;
             annot.visible = (annotTypeMap==null || annotTypeMap.get(scr.getMethod())==null || annotTypeMap.get(scr.getMethod()).get(INVISIBLE) == null);
             double[] thrsh=(annotTypeMap==null || annotTypeMap.get(scr.getMethod())==null) ? null : (double[]) annotTypeMap.get(scr.getMethod()).get(THRESHOLD);