From: hansonr Date: Thu, 5 Jul 2018 10:20:39 +0000 (+0100) Subject: JAL-3026 moves javajs to srcjars X-Git-Tag: Release_2_11_4_0~45^2~18^2~574^2~2 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=98638423b556672dbb6c3a815d99ff1cab884388;p=jalview.git JAL-3026 moves javajs to srcjars - important because Java is using older code from the Jmol jar file --- diff --git a/libjs/jsonsimple-site.zip b/libjs/jsonsimple-site.zip index e9246ba..937da11 100644 Binary files a/libjs/jsonsimple-site.zip and b/libjs/jsonsimple-site.zip differ diff --git a/src/javajs/J2SIgnoreImport.java b/srcjar/javajs/J2SIgnoreImport.java similarity index 100% rename from src/javajs/J2SIgnoreImport.java rename to srcjar/javajs/J2SIgnoreImport.java diff --git a/src/javajs/J2SRequireImport.java b/srcjar/javajs/J2SRequireImport.java similarity index 100% rename from src/javajs/J2SRequireImport.java rename to srcjar/javajs/J2SRequireImport.java diff --git a/src/javajs/_README.txt b/srcjar/javajs/_README.txt similarity index 100% rename from src/javajs/_README.txt rename to srcjar/javajs/_README.txt diff --git a/src/javajs/api/BytePoster.java b/srcjar/javajs/api/BytePoster.java similarity index 100% rename from src/javajs/api/BytePoster.java rename to srcjar/javajs/api/BytePoster.java diff --git a/src/javajs/api/EigenInterface.java b/srcjar/javajs/api/EigenInterface.java similarity index 100% rename from src/javajs/api/EigenInterface.java rename to srcjar/javajs/api/EigenInterface.java diff --git a/src/javajs/api/GenericBinaryDocument.java b/srcjar/javajs/api/GenericBinaryDocument.java similarity index 100% rename from src/javajs/api/GenericBinaryDocument.java rename to srcjar/javajs/api/GenericBinaryDocument.java diff --git a/src/javajs/api/GenericBinaryDocumentReader.java b/srcjar/javajs/api/GenericBinaryDocumentReader.java similarity index 100% rename from src/javajs/api/GenericBinaryDocumentReader.java rename to srcjar/javajs/api/GenericBinaryDocumentReader.java diff --git a/src/javajs/api/GenericCifDataParser.java b/srcjar/javajs/api/GenericCifDataParser.java similarity index 100% rename from src/javajs/api/GenericCifDataParser.java rename to srcjar/javajs/api/GenericCifDataParser.java diff --git a/src/javajs/api/GenericColor.java b/srcjar/javajs/api/GenericColor.java similarity index 100% rename from src/javajs/api/GenericColor.java rename to srcjar/javajs/api/GenericColor.java diff --git a/src/javajs/api/GenericImageDialog.java b/srcjar/javajs/api/GenericImageDialog.java similarity index 100% rename from src/javajs/api/GenericImageDialog.java rename to srcjar/javajs/api/GenericImageDialog.java diff --git a/src/javajs/api/GenericImageEncoder.java b/srcjar/javajs/api/GenericImageEncoder.java similarity index 100% rename from src/javajs/api/GenericImageEncoder.java rename to srcjar/javajs/api/GenericImageEncoder.java diff --git a/src/javajs/api/GenericLineReader.java b/srcjar/javajs/api/GenericLineReader.java similarity index 100% rename from src/javajs/api/GenericLineReader.java rename to srcjar/javajs/api/GenericLineReader.java diff --git a/src/javajs/api/GenericOutputChannel.java b/srcjar/javajs/api/GenericOutputChannel.java similarity index 100% rename from src/javajs/api/GenericOutputChannel.java rename to srcjar/javajs/api/GenericOutputChannel.java diff --git a/src/javajs/api/GenericZipInputStream.java b/srcjar/javajs/api/GenericZipInputStream.java similarity index 100% rename from src/javajs/api/GenericZipInputStream.java rename to srcjar/javajs/api/GenericZipInputStream.java diff --git a/src/javajs/api/GenericZipTools.java b/srcjar/javajs/api/GenericZipTools.java similarity index 100% rename from src/javajs/api/GenericZipTools.java rename to srcjar/javajs/api/GenericZipTools.java diff --git a/src/javajs/api/Interface.java b/srcjar/javajs/api/Interface.java similarity index 100% rename from src/javajs/api/Interface.java rename to srcjar/javajs/api/Interface.java diff --git a/src/javajs/api/JSFunction.java b/srcjar/javajs/api/JSFunction.java similarity index 100% rename from src/javajs/api/JSFunction.java rename to srcjar/javajs/api/JSFunction.java diff --git a/src/javajs/api/JSInterface.java b/srcjar/javajs/api/JSInterface.java similarity index 100% rename from src/javajs/api/JSInterface.java rename to srcjar/javajs/api/JSInterface.java diff --git a/src/javajs/api/JSONEncodable.java b/srcjar/javajs/api/JSONEncodable.java similarity index 100% rename from src/javajs/api/JSONEncodable.java rename to srcjar/javajs/api/JSONEncodable.java diff --git a/src/javajs/api/ResettableStream.java b/srcjar/javajs/api/ResettableStream.java similarity index 100% rename from src/javajs/api/ResettableStream.java rename to srcjar/javajs/api/ResettableStream.java diff --git a/src/javajs/api/ZInputStream.java b/srcjar/javajs/api/ZInputStream.java similarity index 100% rename from src/javajs/api/ZInputStream.java rename to srcjar/javajs/api/ZInputStream.java diff --git a/src/javajs/api/js/J2SObjectInterface.java b/srcjar/javajs/api/js/J2SObjectInterface.java similarity index 100% rename from src/javajs/api/js/J2SObjectInterface.java rename to srcjar/javajs/api/js/J2SObjectInterface.java diff --git a/src/javajs/api/js/JSInterface.java b/srcjar/javajs/api/js/JSInterface.java similarity index 100% rename from src/javajs/api/js/JSInterface.java rename to srcjar/javajs/api/js/JSInterface.java diff --git a/src/javajs/export/PDFCreator.java b/srcjar/javajs/export/PDFCreator.java similarity index 100% rename from src/javajs/export/PDFCreator.java rename to srcjar/javajs/export/PDFCreator.java diff --git a/src/javajs/export/PDFObject.java b/srcjar/javajs/export/PDFObject.java similarity index 100% rename from src/javajs/export/PDFObject.java rename to srcjar/javajs/export/PDFObject.java diff --git a/src/javajs/img/BMPDecoder.java b/srcjar/javajs/img/BMPDecoder.java similarity index 100% rename from src/javajs/img/BMPDecoder.java rename to srcjar/javajs/img/BMPDecoder.java diff --git a/src/javajs/img/CRCEncoder.java b/srcjar/javajs/img/CRCEncoder.java similarity index 100% rename from src/javajs/img/CRCEncoder.java rename to srcjar/javajs/img/CRCEncoder.java diff --git a/src/javajs/img/GifEncoder.java b/srcjar/javajs/img/GifEncoder.java similarity index 100% rename from src/javajs/img/GifEncoder.java rename to srcjar/javajs/img/GifEncoder.java diff --git a/src/javajs/img/ImageEncoder.java b/srcjar/javajs/img/ImageEncoder.java similarity index 100% rename from src/javajs/img/ImageEncoder.java rename to srcjar/javajs/img/ImageEncoder.java diff --git a/src/javajs/img/Jpg64Encoder.java b/srcjar/javajs/img/Jpg64Encoder.java similarity index 100% rename from src/javajs/img/Jpg64Encoder.java rename to srcjar/javajs/img/Jpg64Encoder.java diff --git a/src/javajs/img/JpgEncoder.java b/srcjar/javajs/img/JpgEncoder.java similarity index 100% rename from src/javajs/img/JpgEncoder.java rename to srcjar/javajs/img/JpgEncoder.java diff --git a/src/javajs/img/PdfEncoder.java b/srcjar/javajs/img/PdfEncoder.java similarity index 100% rename from src/javajs/img/PdfEncoder.java rename to srcjar/javajs/img/PdfEncoder.java diff --git a/src/javajs/img/PngEncoder.java b/srcjar/javajs/img/PngEncoder.java similarity index 100% rename from src/javajs/img/PngEncoder.java rename to srcjar/javajs/img/PngEncoder.java diff --git a/src/javajs/img/PpmEncoder.java b/srcjar/javajs/img/PpmEncoder.java similarity index 100% rename from src/javajs/img/PpmEncoder.java rename to srcjar/javajs/img/PpmEncoder.java diff --git a/src/javajs/util/A4.java b/srcjar/javajs/util/A4.java similarity index 100% rename from src/javajs/util/A4.java rename to srcjar/javajs/util/A4.java diff --git a/src/javajs/util/AU.java b/srcjar/javajs/util/AU.java similarity index 100% rename from src/javajs/util/AU.java rename to srcjar/javajs/util/AU.java diff --git a/src/javajs/util/AjaxURLConnection.java b/srcjar/javajs/util/AjaxURLConnection.java similarity index 100% rename from src/javajs/util/AjaxURLConnection.java rename to srcjar/javajs/util/AjaxURLConnection.java diff --git a/src/javajs/util/AjaxURLStreamHandler.java b/srcjar/javajs/util/AjaxURLStreamHandler.java similarity index 100% rename from src/javajs/util/AjaxURLStreamHandler.java rename to srcjar/javajs/util/AjaxURLStreamHandler.java diff --git a/src/javajs/util/AjaxURLStreamHandlerFactory.java b/srcjar/javajs/util/AjaxURLStreamHandlerFactory.java similarity index 100% rename from src/javajs/util/AjaxURLStreamHandlerFactory.java rename to srcjar/javajs/util/AjaxURLStreamHandlerFactory.java diff --git a/src/javajs/util/ArrayDataReader.java b/srcjar/javajs/util/ArrayDataReader.java similarity index 100% rename from src/javajs/util/ArrayDataReader.java rename to srcjar/javajs/util/ArrayDataReader.java diff --git a/src/javajs/util/BArray.java b/srcjar/javajs/util/BArray.java similarity index 100% rename from src/javajs/util/BArray.java rename to srcjar/javajs/util/BArray.java diff --git a/src/javajs/util/BC.java b/srcjar/javajs/util/BC.java similarity index 100% rename from src/javajs/util/BC.java rename to srcjar/javajs/util/BC.java diff --git a/src/javajs/util/BS.java b/srcjar/javajs/util/BS.java similarity index 100% rename from src/javajs/util/BS.java rename to srcjar/javajs/util/BS.java diff --git a/src/javajs/util/Base64.java b/srcjar/javajs/util/Base64.java similarity index 100% rename from src/javajs/util/Base64.java rename to srcjar/javajs/util/Base64.java diff --git a/src/javajs/util/BinaryDocument.java b/srcjar/javajs/util/BinaryDocument.java similarity index 100% rename from src/javajs/util/BinaryDocument.java rename to srcjar/javajs/util/BinaryDocument.java diff --git a/src/javajs/util/CU.java b/srcjar/javajs/util/CU.java similarity index 100% rename from src/javajs/util/CU.java rename to srcjar/javajs/util/CU.java diff --git a/src/javajs/util/CifDataParser.java b/srcjar/javajs/util/CifDataParser.java similarity index 100% rename from src/javajs/util/CifDataParser.java rename to srcjar/javajs/util/CifDataParser.java diff --git a/src/javajs/util/CompoundDocDirEntry.java b/srcjar/javajs/util/CompoundDocDirEntry.java similarity index 100% rename from src/javajs/util/CompoundDocDirEntry.java rename to srcjar/javajs/util/CompoundDocDirEntry.java diff --git a/src/javajs/util/CompoundDocHeader.java b/srcjar/javajs/util/CompoundDocHeader.java similarity index 100% rename from src/javajs/util/CompoundDocHeader.java rename to srcjar/javajs/util/CompoundDocHeader.java diff --git a/src/javajs/util/CompoundDocument.java b/srcjar/javajs/util/CompoundDocument.java similarity index 100% rename from src/javajs/util/CompoundDocument.java rename to srcjar/javajs/util/CompoundDocument.java diff --git a/src/javajs/util/DF.java b/srcjar/javajs/util/DF.java similarity index 100% rename from src/javajs/util/DF.java rename to srcjar/javajs/util/DF.java diff --git a/src/javajs/util/DataReader.java b/srcjar/javajs/util/DataReader.java similarity index 100% rename from src/javajs/util/DataReader.java rename to srcjar/javajs/util/DataReader.java diff --git a/src/javajs/util/DebugJS.java b/srcjar/javajs/util/DebugJS.java similarity index 100% rename from src/javajs/util/DebugJS.java rename to srcjar/javajs/util/DebugJS.java diff --git a/src/javajs/util/Eigen.java b/srcjar/javajs/util/Eigen.java similarity index 100% rename from src/javajs/util/Eigen.java rename to srcjar/javajs/util/Eigen.java diff --git a/src/javajs/util/Encoding.java b/srcjar/javajs/util/Encoding.java similarity index 100% rename from src/javajs/util/Encoding.java rename to srcjar/javajs/util/Encoding.java diff --git a/src/javajs/util/JSAudioThread.java b/srcjar/javajs/util/JSAudioThread.java similarity index 100% rename from src/javajs/util/JSAudioThread.java rename to srcjar/javajs/util/JSAudioThread.java diff --git a/src/javajs/util/JSJSONParser.java b/srcjar/javajs/util/JSJSONParser.java similarity index 100% rename from src/javajs/util/JSJSONParser.java rename to srcjar/javajs/util/JSJSONParser.java diff --git a/src/javajs/util/JSONException.java b/srcjar/javajs/util/JSONException.java similarity index 100% rename from src/javajs/util/JSONException.java rename to srcjar/javajs/util/JSONException.java diff --git a/src/javajs/util/JSThread.java b/srcjar/javajs/util/JSThread.java similarity index 100% rename from src/javajs/util/JSThread.java rename to srcjar/javajs/util/JSThread.java diff --git a/src/javajs/util/LimitedLineReader.java b/srcjar/javajs/util/LimitedLineReader.java similarity index 100% rename from src/javajs/util/LimitedLineReader.java rename to srcjar/javajs/util/LimitedLineReader.java diff --git a/src/javajs/util/ListDataReader.java b/srcjar/javajs/util/ListDataReader.java similarity index 100% rename from src/javajs/util/ListDataReader.java rename to srcjar/javajs/util/ListDataReader.java diff --git a/src/javajs/util/Lst.java b/srcjar/javajs/util/Lst.java similarity index 100% rename from src/javajs/util/Lst.java rename to srcjar/javajs/util/Lst.java diff --git a/src/javajs/util/M3.java b/srcjar/javajs/util/M3.java similarity index 100% rename from src/javajs/util/M3.java rename to srcjar/javajs/util/M3.java diff --git a/src/javajs/util/M34.java b/srcjar/javajs/util/M34.java similarity index 100% rename from src/javajs/util/M34.java rename to srcjar/javajs/util/M34.java diff --git a/src/javajs/util/M4.java b/srcjar/javajs/util/M4.java similarity index 100% rename from src/javajs/util/M4.java rename to srcjar/javajs/util/M4.java diff --git a/src/javajs/util/Matrix.java b/srcjar/javajs/util/Matrix.java similarity index 100% rename from src/javajs/util/Matrix.java rename to srcjar/javajs/util/Matrix.java diff --git a/src/javajs/util/Measure.java b/srcjar/javajs/util/Measure.java similarity index 100% rename from src/javajs/util/Measure.java rename to srcjar/javajs/util/Measure.java diff --git a/src/javajs/util/MessagePackReader.java b/srcjar/javajs/util/MessagePackReader.java similarity index 100% rename from src/javajs/util/MessagePackReader.java rename to srcjar/javajs/util/MessagePackReader.java diff --git a/src/javajs/util/OC.java b/srcjar/javajs/util/OC.java similarity index 100% rename from src/javajs/util/OC.java rename to srcjar/javajs/util/OC.java diff --git a/src/javajs/util/P3.java b/srcjar/javajs/util/P3.java similarity index 100% rename from src/javajs/util/P3.java rename to srcjar/javajs/util/P3.java diff --git a/src/javajs/util/P3i.java b/srcjar/javajs/util/P3i.java similarity index 100% rename from src/javajs/util/P3i.java rename to srcjar/javajs/util/P3i.java diff --git a/src/javajs/util/P4.java b/srcjar/javajs/util/P4.java similarity index 100% rename from src/javajs/util/P4.java rename to srcjar/javajs/util/P4.java diff --git a/src/javajs/util/PT.java b/srcjar/javajs/util/PT.java similarity index 100% rename from src/javajs/util/PT.java rename to srcjar/javajs/util/PT.java diff --git a/src/javajs/util/Quat.java b/srcjar/javajs/util/Quat.java similarity index 100% rename from src/javajs/util/Quat.java rename to srcjar/javajs/util/Quat.java diff --git a/src/javajs/util/Rdr.java b/srcjar/javajs/util/Rdr.java similarity index 100% rename from src/javajs/util/Rdr.java rename to srcjar/javajs/util/Rdr.java diff --git a/src/javajs/util/SB.java b/srcjar/javajs/util/SB.java similarity index 100% rename from src/javajs/util/SB.java rename to srcjar/javajs/util/SB.java diff --git a/src/javajs/util/StringDataReader.java b/srcjar/javajs/util/StringDataReader.java similarity index 100% rename from src/javajs/util/StringDataReader.java rename to srcjar/javajs/util/StringDataReader.java diff --git a/src/javajs/util/T3.java b/srcjar/javajs/util/T3.java similarity index 100% rename from src/javajs/util/T3.java rename to srcjar/javajs/util/T3.java diff --git a/src/javajs/util/T3d.java b/srcjar/javajs/util/T3d.java similarity index 100% rename from src/javajs/util/T3d.java rename to srcjar/javajs/util/T3d.java diff --git a/src/javajs/util/T3i.java b/srcjar/javajs/util/T3i.java similarity index 100% rename from src/javajs/util/T3i.java rename to srcjar/javajs/util/T3i.java diff --git a/src/javajs/util/T4.java b/srcjar/javajs/util/T4.java similarity index 100% rename from src/javajs/util/T4.java rename to srcjar/javajs/util/T4.java diff --git a/src/javajs/util/V3.java b/srcjar/javajs/util/V3.java similarity index 100% rename from src/javajs/util/V3.java rename to srcjar/javajs/util/V3.java diff --git a/src/javajs/util/V3d.java b/srcjar/javajs/util/V3d.java similarity index 100% rename from src/javajs/util/V3d.java rename to srcjar/javajs/util/V3d.java diff --git a/src/javajs/util/XmlUtil.java b/srcjar/javajs/util/XmlUtil.java similarity index 100% rename from src/javajs/util/XmlUtil.java rename to srcjar/javajs/util/XmlUtil.java diff --git a/src/javajs/util/ZipData.java b/srcjar/javajs/util/ZipData.java similarity index 100% rename from src/javajs/util/ZipData.java rename to srcjar/javajs/util/ZipData.java diff --git a/src/javajs/util/ZipTools.java b/srcjar/javajs/util/ZipTools.java similarity index 100% rename from src/javajs/util/ZipTools.java rename to srcjar/javajs/util/ZipTools.java