From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 15 Feb 2006 15:21:45 +0000 (+0000)
Subject: Threshold is a single element
X-Git-Tag: Root_VamJalview_2_07b+~137
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=9b2d0f1f47d3a073c91f354775bea6a274812709;p=jalview.git

Threshold is a single element
---

diff --git a/src/jalview/schemes/AnnotationColourGradient.java b/src/jalview/schemes/AnnotationColourGradient.java
index 5825612..433af79 100755
--- a/src/jalview/schemes/AnnotationColourGradient.java
+++ b/src/jalview/schemes/AnnotationColourGradient.java
@@ -46,8 +46,8 @@ public class AnnotationColourGradient extends ResidueColourScheme
 
       aboveAnnotationThreshold = aboveThreshold;
 
-      if(aboveThreshold!=NO_THRESHOLD && annotation.graphLines!=null)
-        annotationThreshold = annotation.getGraphLine(0);
+      if(aboveThreshold!=NO_THRESHOLD && annotation.threshold!=null)
+        annotationThreshold = annotation.threshold;
 
       r1 = minColour.getRed();
       g1 = minColour.getGreen();