From: Jim Procter <jprocter@dundee.ac.uk>
Date: Mon, 21 Apr 2014 08:59:08 +0000 (+0100)
Subject: JAL-1481 relevant todo re warning user for broken regex
X-Git-Tag: Jalview_2_9~123^2~31
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=9d4dbc8a3e7616145210154e8dfe8feb0afc49cf;p=jalview.git

JAL-1481 relevant todo re warning user for broken regex
---

diff --git a/src/jalview/analysis/Finder.java b/src/jalview/analysis/Finder.java
index 06d75ac..a055106 100644
--- a/src/jalview/analysis/Finder.java
+++ b/src/jalview/analysis/Finder.java
@@ -186,7 +186,7 @@ public class Finder
           {
             continue;
           }
-
+// if invalid string used, then regex has no matched to/from
           int sres = seq
                   .findPosition(resIndex
                           + Integer.parseInt(spaces.elementAt(resIndex)