From: Jim Procter <jprocter@issues.jalview.org>
Date: Tue, 10 Nov 2015 15:00:47 +0000 (+0000)
Subject: JAL-653 added missing pragma string to processing filter
X-Git-Tag: Release_2_10_0~296^2~132
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=a27c9cd7bb55d83399dff356a1c324868551dcc2;p=jalview.git

JAL-653 added missing pragma string to processing filter
---

diff --git a/src/jalview/io/FeaturesFile.java b/src/jalview/io/FeaturesFile.java
index c6bc1dd..a670e6e 100755
--- a/src/jalview/io/FeaturesFile.java
+++ b/src/jalview/io/FeaturesFile.java
@@ -705,6 +705,7 @@ public class FeaturesFile extends AlignFile
   static
   {
     GFFPRAGMA = new HashMap<String, GffPragmas>();
+    GFFPRAGMA.put("gff-version", GffPragmas.gff_version);
     GFFPRAGMA.put("sequence-region", GffPragmas.sequence_region);
     GFFPRAGMA.put("feature-ontology", GffPragmas.feature_ontology);
     GFFPRAGMA.put("#", GffPragmas.hash);
@@ -1510,6 +1511,7 @@ public class FeaturesFile extends AlignFile
   /**
    * this is only for the benefit of object polymorphism - method does nothing.
    */
+  @Override
   public void parse()
   {
     // IGNORED
@@ -1520,6 +1522,7 @@ public class FeaturesFile extends AlignFile
    * 
    * @return error message
    */
+  @Override
   public String print()
   {
     return "USE printGFFFormat() or printJalviewFormat()";