From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Wed, 6 Feb 2013 16:41:01 +0000 (+0000)
Subject: JAL-1199 added test for Rfam Stockholm file example
X-Git-Tag: Release_2_8_0b1~1^2~68^2~1
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=a3ada1606e51721c83f4b271539bf8d443443ff5;p=jalview.git

JAL-1199 added test for Rfam Stockholm file example
---

diff --git a/test/jalview/io/StockholmFileTest.java b/test/jalview/io/StockholmFileTest.java
index cac1a88..86ab0b2 100644
--- a/test/jalview/io/StockholmFileTest.java
+++ b/test/jalview/io/StockholmFileTest.java
@@ -26,7 +26,7 @@ public class StockholmFileTest
       x.printStackTrace();
     }
   }
-  static String PfamFile = "examples/PF00111_seed.stk";
+  static String PfamFile = "examples/PF00111_seed.stk", RfamFile="examples/RF00031_folded.stk";
 
   @Test
   public void pfamFileIO() throws Exception
@@ -44,6 +44,11 @@ public class StockholmFileTest
       }
       assertTrue("PF00111 seed alignment has at least 1 PDB file, but the reader found none.",numpdb>0);
   }
+  @Test
+  public void rfamFileIO() throws Exception
+  {
+      test(new File(RfamFile));
+  }
 
   private void test(File f)
   {