From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 7 Jul 2006 13:05:15 +0000 (+0000)
Subject: changeColour is public
X-Git-Tag: Release_2_1~303
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=aa4136774208d405880ed4ecaa16fdd4971bb67f;p=jalview.git

changeColour is public
---

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index c058f09..4678c51 100755
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -141,6 +141,11 @@ public class AlignFrame
 
   }
 
+  public AlignViewport getViewport()
+  {
+    return viewport;
+  }
+
   /* Set up intrinsic listeners for dynamically generated GUI bits. */
   private void addServiceListeners()
   {
@@ -1656,7 +1661,7 @@ public class AlignFrame
    *
    * @param cs DOCUMENT ME!
    */
-  void changeColour(ColourSchemeI cs)
+  public void changeColour(ColourSchemeI cs)
   {
     int threshold = 0;
 
@@ -1994,13 +1999,10 @@ public class AlignFrame
    */
   public void removeRedundancyMenuItem_actionPerformed(ActionEvent e)
   {
-    RedundancyPanel sp = new RedundancyPanel(alignPanel, this);
-    JInternalFrame frame = new JInternalFrame();
-    frame.setContentPane(sp);
-    Desktop.addInternalFrame(frame, "Redundancy threshold selection", 400,
-                             100, false);
+    new RedundancyPanel(alignPanel, this);
   }
 
+
   /**
    * DOCUMENT ME!
    *