From: Jim Procter <jprocter@issues.jalview.org>
Date: Thu, 4 Aug 2016 19:55:28 +0000 (+0100)
Subject: JAL-2110 comment on failing test (consider skipping for release ?)
X-Git-Tag: Release_2_10_0~47^2~4^2~43^2~60
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=ab995eb523125cc05c94e08843ce1a8aedb07c06;p=jalview.git

JAL-2110 comment on failing test (consider skipping for release ?)
---

diff --git a/test/jalview/analysis/AlignmentUtilsTests.java b/test/jalview/analysis/AlignmentUtilsTests.java
index 7661c5d..237aaac 100644
--- a/test/jalview/analysis/AlignmentUtilsTests.java
+++ b/test/jalview/analysis/AlignmentUtilsTests.java
@@ -2449,6 +2449,8 @@ public class AlignmentUtilsTests
   {
     SequenceI dna1 = new Sequence("dna1", "cccGGGTTTaaa");
     SequenceI dna2 = new Sequence("dna2", "CCCgggtttAAA");
+    // See JAL-2110 - this test will fail due to alignAs not coping with
+    // distinct sequences sharing the same dataset sequence reference
     SequenceI as1 = dna1.deriveSequence(), as2 = dna1.deriveSequence()
             .getSubSequence(3, 7), as3 = dna2.deriveSequence();
     as1.insertCharAt(6, 5, '-');