From: cmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Date: Sun, 27 Feb 2011 04:23:29 +0000 (+0000)
Subject: Edited wiki page PhyloBioRuby through web user interface.
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=ae054800741315647bb943ccc7a638206ad73f1a;p=jalview.git

Edited wiki page PhyloBioRuby through web user interface.
---

diff --git a/wiki/PhyloBioRuby.wiki b/wiki/PhyloBioRuby.wiki
index 856e7d5..80d1927 100644
--- a/wiki/PhyloBioRuby.wiki
+++ b/wiki/PhyloBioRuby.wiki
@@ -15,12 +15,16 @@ Tutorial for multiple sequence alignments and phylogenetic methods in !BioRuby -
 
 === Reading in a Multiple Sequence Alignment from a File ===
 
-_... to be done_
+Reading in a clustalw formatted multiple sequence alignment:
 
 {{{
 #!/usr/bin/env ruby
 require 'bio'
 
+# Reads in a clustalw formatted multiple sequence alignment
+# from a file named "infile_clustalw.aln" and stores it in 'report'.
+report = Bio::ClustalW::Report.new(File.read('infile_clustalw.aln'))
+
 }}}