From: Jim Procter <jprocter@dundee.ac.uk>
Date: Fri, 18 Apr 2014 15:18:36 +0000 (+0100)
Subject: JAL-1478 test to demonstrate bug
X-Git-Tag: Jalview_2_9~123^2~36
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=ae3a5e9ecc087f6ada0cee07efde4b0d0ba76a41;p=jalview.git

JAL-1478 test to demonstrate bug
---

diff --git a/examples/testdata/test_grpannot.jva b/examples/testdata/test_grpannot.jva
new file mode 100644
index 0000000..1259bdc
--- /dev/null
+++ b/examples/testdata/test_grpannot.jva
@@ -0,0 +1,5 @@
+JALVIEW_ANNOTATION
+
+SEQUENCE_GROUP	mygrpa	1	10	-1	FER_CAPAA	FER_SPIOL	FER1_MAIZE
+SEQUENCE_GROUP	another group	150	250	-1	FER1_MAIZE
+
diff --git a/test/jalview/io/AnnotationFileIOTest.java b/test/jalview/io/AnnotationFileIOTest.java
index cfbc884..7d6a15f 100644
--- a/test/jalview/io/AnnotationFileIOTest.java
+++ b/test/jalview/io/AnnotationFileIOTest.java
@@ -30,9 +30,19 @@ import org.junit.Test;
 public class AnnotationFileIOTest
 {
 
-  static String TestFiles[][] = {{ "Test example annotation import/export","examples/uniref50.fa", "examples/testdata/example_annot_file.jva" }
-          ,{"Test multiple combine annotation statements import/export","examples/uniref50.fa", "examples/testdata/test_combine_annot.jva"}
-          ,{"Test multiple combine annotation statements with sequence_ref import/export","examples/uniref50.fa", "examples/testdata/uniref50_iupred.jva"}};
+  static String TestFiles[][] =
+  {
+      { "Test example annotation import/export", "examples/uniref50.fa",
+          "examples/testdata/example_annot_file.jva" },
+      { "Test multiple combine annotation statements import/export",
+          "examples/uniref50.fa",
+          "examples/testdata/test_combine_annot.jva" },
+      {
+          "Test multiple combine annotation statements with sequence_ref import/export",
+          "examples/uniref50.fa", "examples/testdata/uniref50_iupred.jva" },
+      {
+          "Test group only annotation file parsing results in parser indicating annotation was parsed",
+          "examples/uniref50.fa", "examples/testdata/test_grpannot.jva" } };
 
   @Test
   public void exampleAnnotationFileIO() throws Exception