From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Fri, 19 Feb 2016 16:46:01 +0000 (+0000)
Subject: JAL-1705 JAL-1191 more terms added to hard-coded version
X-Git-Tag: Release_2_10_0~296^2~22^2~6
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=b223b8f0879291e998b0e197e3901805837e6cf0;p=jalview.git

JAL-1705 JAL-1191 more terms added to hard-coded version
---

diff --git a/src/jalview/io/gff/SequenceOntologyLite.java b/src/jalview/io/gff/SequenceOntologyLite.java
index d2e6654..b3f8161 100644
--- a/src/jalview/io/gff/SequenceOntologyLite.java
+++ b/src/jalview/io/gff/SequenceOntologyLite.java
@@ -37,6 +37,7 @@ public class SequenceOntologyLite implements SequenceOntologyI
     { "snRNA_gene", "gene" },
     { "miRNA_gene", "gene" },
     { "lincRNA_gene", "gene" },
+    { "rRNA_gene", "gene" },
     
     /*
      * transcript sub-types:
@@ -49,6 +50,7 @@ public class SequenceOntologyLite implements SequenceOntologyI
     { "snRNA", "transcript" },
     { "miRNA", "transcript" },
     { "lincRNA", "transcript" },
+    { "rRNA", "transcript" },
     // there are many more sub-types of ncRNA...
     
     /*