From: jprocter Date: Tue, 28 Nov 2006 11:38:01 +0000 (+0000) Subject: 2.2 documentation X-Git-Tag: Release_2_2~15 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=b7f6daa7713a06ec6247ebcf9e9a9af32cd74c4f;p=jalview.git 2.2 documentation --- diff --git a/help/html/features/hiddenRegions.html b/help/html/features/hiddenRegions.html index b119b91..bde6a8d 100644 --- a/help/html/features/hiddenRegions.html +++ b/help/html/features/hiddenRegions.html @@ -24,7 +24,7 @@ the sequences in that group.
The hidden representative sequences will not be used in any calculations or web service alignments (nb. this may change in the future).

Hidden Sequence Representatives and -Multiple Views
+Multiple Views
A word of warning: hidden representative sequence groups are only partly implemented in the jalview 2.2 release, and the following issues will be resolved in the future.
diff --git a/help/html/features/multipleViews.html b/help/html/features/multipleViews.html index 7b17d06..1391a58 100644 --- a/help/html/features/multipleViews.html +++ b/help/html/features/multipleViews.html @@ -29,6 +29,12 @@ to expand each view into its own linked alignment window. Expanded views are gathered back into into a single tabbed alignment window by pressing G, or by selecting "View→Gather").

+

Hidden Sequence Representatives and Multiple +Views

+

There are some unexpected interactions between hidden sequence +representatives and their display in multiple views. See the +corresponding entry in the documentation +for hidden regions.

Structure and Analysis Viewers and Multiple Views

A tree calculated on a particular view, or loaded onto it, is by @@ -42,8 +48,8 @@ views, using the PCA Viewer's "View→Associate Nodes" submenu.

Currently, a PDB Structure Viewer opened on a structure associated with a sequence in a particular view -will only be associated with the seuqence as displayed in that view.
This -will be resolved in a future release