From: Ben Soares <b.soares@dundee.ac.uk>
Date: Mon, 1 May 2023 00:36:51 +0000 (+0100)
Subject: JAL-629 real life test for --allframes
X-Git-Tag: Release_2_11_4_0~353
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=b9e759d4f273ff99675c6c1fc7fd91d791948b93;p=jalview.git

JAL-629 real life test for --allframes
---

diff --git a/test/jalview/bin/CommandsTest.java b/test/jalview/bin/CommandsTest.java
index 2d3724b..57c4d0d 100644
--- a/test/jalview/bin/CommandsTest.java
+++ b/test/jalview/bin/CommandsTest.java
@@ -14,6 +14,7 @@ import org.testng.annotations.BeforeClass;
 import org.testng.annotations.DataProvider;
 import org.testng.annotations.Test;
 
+import jalview.bin.argparser.Arg;
 import jalview.gui.AlignFrame;
 import jalview.gui.Desktop;
 import jalview.gui.JvOptionPane;
@@ -219,4 +220,40 @@ public class CommandsTest
     }
   }
 
+  @Test(groups = "Functional", dataProvider = "allLinkedIdsData")
+  public void allLinkedIdsTest(String cmdLine, Arg a, String[] filenames)
+  {
+    String[] args = cmdLine.split("\\s+");
+    Jalview.main(args);
+    Commands cmds = Jalview.getInstance().getCommands();
+    Assert.assertNotNull(cmds);
+    for (String filename : filenames)
+    {
+      Assert.assertTrue(new File(filename).exists(),
+              "File '" + filename + "' was not created");
+    }
+    cleanupFiles(filenames);
+  }
+
+  @DataProvider(name = "allLinkedIdsData")
+  public Object[][] allLinkedIdsData()
+  {
+    return new Object[][] {
+        //
+        /*
+        { "--open=test/jalview/bin/argparser/testfiles/*.fa --substitutions --allframes --output={dirname}/{basename}.stk --close",
+            Arg.OUTPUT, new String[]
+            { "test/jalview/bin/argparser/testfiles/test1.stk",
+                "test/jalview/bin/argparser/testfiles/test2.stk",
+                "test/jalview/bin/argparser/testfiles/test3.stk", } },
+        */
+        { "--open=test/jalview/bin/argparser/testfiles/*.fa --substitutions --allframes --image={dirname}/{basename}.png --close",
+            Arg.IMAGE, new String[]
+            { "test/jalview/bin/argparser/testfiles/test1.png",
+                "test/jalview/bin/argparser/testfiles/test2.png",
+                "test/jalview/bin/argparser/testfiles/test3.png", } },
+        //
+    };
+  }
+
 }