From: jprocter Date: Wed, 22 Sep 2010 01:03:48 +0000 (+0000) Subject: new export options X-Git-Tag: Release_2_6~14 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=ba919533064dbf4c1f5d85aa78a54ee56b36e6dd;p=jalview.git new export options --- diff --git a/help/html/calculations/pca.html b/help/html/calculations/pca.html index d9b4b45..082cd84 100755 --- a/help/html/calculations/pca.html +++ b/help/html/calculations/pca.html @@ -63,7 +63,9 @@ View menu is checked, and the plot background colour changed from the View→Background Colour.. dialog box. The File menu allows the view to be saved (File→Save submenu) as an EPS or PNG image or printed, and the original alignment data and matrix resulting -from its PCA analysis to be retrieved.

+from its PCA analysis to be retrieved. The coordinates for the whole PCA +space, or just the current view may also be exported as CSV files for +visualization in another program or further analysis.

A tool tip gives the sequence ID corresponding to a point in the space, and clicking a point toggles the selection of the corresponding sequence in the associated alignment window views. Rectangular region @@ -77,5 +79,6 @@ similarity space, but any eigenvector can be used by changing the selected dimension for the x, y, or z axis through each ones menu located below the 3d display.

+