From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Mon, 23 Mar 2015 14:41:57 +0000 (+0000)
Subject: JAL-1681 (import reorder only)
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=bb074f6d0c036c1b7754d83fe4dbd9f00e95fe72;p=jalview.git

JAL-1681 (import reorder only)
---

diff --git a/src/jalview/workers/ComplementConsensusThread.java b/src/jalview/workers/ComplementConsensusThread.java
index fcc5a82..2e4424e 100644
--- a/src/jalview/workers/ComplementConsensusThread.java
+++ b/src/jalview/workers/ComplementConsensusThread.java
@@ -1,5 +1,7 @@
 package jalview.workers;
 
+import java.util.Hashtable;
+
 import jalview.analysis.AAFrequency;
 import jalview.api.AlignViewportI;
 import jalview.api.AlignmentViewPanel;
@@ -7,8 +9,6 @@ import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.AlignmentI;
 import jalview.datamodel.SequenceI;
 
-import java.util.Hashtable;
-
 /**
  * A thread to recompute the consensus of the cDNA complement for a linked
  * protein alignment.
diff --git a/src/jalview/workers/ConsensusThread.java b/src/jalview/workers/ConsensusThread.java
index fbc2d59..f244242 100644
--- a/src/jalview/workers/ConsensusThread.java
+++ b/src/jalview/workers/ConsensusThread.java
@@ -20,6 +20,8 @@
  */
 package jalview.workers;
 
+import java.util.Hashtable;
+
 import jalview.analysis.AAFrequency;
 import jalview.api.AlignCalcWorkerI;
 import jalview.api.AlignViewportI;
@@ -30,8 +32,6 @@ import jalview.datamodel.Annotation;
 import jalview.datamodel.SequenceI;
 import jalview.schemes.ColourSchemeI;
 
-import java.util.Hashtable;
-
 public class ConsensusThread extends AlignCalcWorker implements
         AlignCalcWorkerI
 {
@@ -87,11 +87,10 @@ public class ConsensusThread extends AlignCalcWorker implements
         calcMan.workerComplete(this);
         return;
       }
+
       eraseConsensus(aWidth);
-      // long now = System.currentTimeMillis();
       computeConsensus(alignment);
       updateResultAnnotation(true);
-      // System.out.println(System.currentTimeMillis() - now);
 
       if (ap != null)
       {