From: tcofoegbu Date: Thu, 30 Apr 2015 11:47:08 +0000 (+0100) Subject: JAL-1717 updated the PDBEntry model and updated the method use for its equality test... X-Git-Tag: Jalview_2_9~40^2 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=bc27e1b604af729b363da1f29bdd5774ca79f4e4;p=jalview.git JAL-1717 updated the PDBEntry model and updated the method use for its equality test. Furthermore, a couple of other methods where modified to ensure PDB entries are always unique --- diff --git a/help/html/features/pdbsequencefetcher.html b/help/html/features/pdbsequencefetcher.html index 0a7802e..15dc2c6 100644 --- a/help/html/features/pdbsequencefetcher.html +++ b/help/html/features/pdbsequencefetcher.html @@ -32,27 +32,25 @@ or to cross-reference other bioinformatics websites before retrieving a sequence data in jalview. The underlying technology is provided by EBI and is based on Apache Solr which is a text based search engine.

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The PDB Sequence Fetcher interface can be opened by selecting PDB as the choice database from the 'Select Database Retrieval Source' interface of Sequence Fetcher.

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- - PDB sequence fetcher (introduced in Jalview 2.x.x) - -

- Searching the PDB Database
Once the - interface is opened, typing in the search text box will execute a live - query to the PDB database and display the results on-the-fly as seen - in the screen-shot above. Use the drop-down menu to select a specific - field to search by in the PDB database, the default option is 'ALL'. - Furthermore, the PDB search interface also provides the following - functionalities: + PDB sequence fetcher (introduced in Jalview 2.x.x) +

+ + Searching the PDB Database +
Once the interface is opened, typing in the search text box + will execute a live query to the PDB database and display the results + on-the-fly as seen in the screen-shot above. Use the drop-down menu to + select a specific field to search by in the PDB database, the default + option is + 'ALL'. Furthermore, the PDB search interface also + provides the following functionalities: