From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 11 Feb 2005 14:07:49 +0000 (+0000)
Subject: must add all features even if start and end res are beyond sequence length
X-Git-Tag: Release_2_0~661
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=c00de526ca91a39cb14cb4d112e962f0b0d8e5eb;p=jalview.git

must add all features even if start and end res are beyond sequence length
---

diff --git a/src/jalview/analysis/SequenceFeatureFetcher.java b/src/jalview/analysis/SequenceFeatureFetcher.java
index 6560504..4ad1f45 100755
--- a/src/jalview/analysis/SequenceFeatureFetcher.java
+++ b/src/jalview/analysis/SequenceFeatureFetcher.java
@@ -202,16 +202,12 @@ void ReadUniprotFile(String [] result, RandomAccessFile out, AlignmentI align)
        if(out!=null)
          try{ out.writeBytes("</feature>\n"); }catch(Exception ex){}
 
-
-       if(sstart>=sequence.getStart() && eend<=sequence.getEnd())
-       {
          SequenceFeature sf = new SequenceFeature(type,
              sstart,
              eend,
              description,
              status);
          features.add(sf);
-       }
      }
 
      if(result[r].indexOf("<sequence")>-1)