From: cmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Date: Sat, 14 Jul 2012 03:23:40 +0000 (+0000)
Subject: in progress
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=c1802b86ad3e5ec61df8d8b0dd0ee9f6ce705f96;p=jalview.git

in progress
---

diff --git a/forester/java/src/org/forester/msa/MsaCompactor.java b/forester/java/src/org/forester/msa/MsaCompactor.java
index 90b2ccc..64c6957 100644
--- a/forester/java/src/org/forester/msa/MsaCompactor.java
+++ b/forester/java/src/org/forester/msa/MsaCompactor.java
@@ -141,7 +141,7 @@ public class MsaCompactor {
 
     final private void write( final File outfile, final double gr ) throws IOException {
         writeMsa( outfile + "_" + _msa.getNumberOfSequences() + "_" + _msa.getLength() + "_"
-                + ForesterUtil.roundToInt( gr * 100 ) + ".aln" );
+                + ForesterUtil.roundToInt( gr * 100 ) + ".fasta" );
     }
 
     final private void writeMsa( final String outfile ) throws IOException {