From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Sun, 8 Jul 2012 14:20:32 +0000 (+0100)
Subject: JAL-976 clean out associated annotation
X-Git-Tag: Jalview_2_9~419
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=c25e91301b4e05d8941215d845f863c57a43fd61;p=jalview.git

JAL-976 clean out associated annotation
---

diff --git a/src/jalview/ws/jws2/AAConsClient.java b/src/jalview/ws/jws2/AAConsClient.java
index bf7be5d..d1bf303 100644
--- a/src/jalview/ws/jws2/AAConsClient.java
+++ b/src/jalview/ws/jws2/AAConsClient.java
@@ -176,6 +176,10 @@ public class AAConsClient extends JabawsAlignCalcWorker
 
   public static void removeAAConsAnnotation(AlignmentPanel alignPanel)
   {
+    for (AlignmentAnnotation aa: alignPanel.getAlignment().findAnnotation(SequenceAnnotationWSClient.AAConsCalcId))
+    {
+      alignPanel.getAlignment().deleteAnnotation(aa);
+    }
     // List<AlignmentAnnotation>
     // ourannots=alignPanel.getAlignment().findAnnotation(Screen3D.)
     // TODO Auto-generated method stub