From: cmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Date: Wed, 5 Dec 2012 03:55:57 +0000 (+0000)
Subject: work on taxonomy extraction for applets as well...
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=c28cb5c34ced7d8ff25df21bb416dd7da3762d8b;p=jalview.git

work on taxonomy extraction for applets as well...
---

diff --git a/forester/java/src/org/forester/archaeopteryx/Configuration.java b/forester/java/src/org/forester/archaeopteryx/Configuration.java
index f506905..7c84054 100644
--- a/forester/java/src/org/forester/archaeopteryx/Configuration.java
+++ b/forester/java/src/org/forester/archaeopteryx/Configuration.java
@@ -1222,7 +1222,7 @@ public final class Configuration {
             else if ( s.equalsIgnoreCase( "yes" ) ) {
                 setTaxonomyExtraction( TAXONOMY_EXTRACTION.YES );
             }
-            else if ( s.equalsIgnoreCase( "pfam_only" ) ) {
+            else if ( s.equalsIgnoreCase( "pfam" ) ) {
                 setTaxonomyExtraction( TAXONOMY_EXTRACTION.PFAM_STYLE_ONLY );
             }
             else {