From: kjvdheide <kjvanderheide@dundee.ac.uk>
Date: Thu, 26 Oct 2017 14:17:58 +0000 (+0100)
Subject: added abbreviations
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=cc2b217e11a5ad7ae4d03c693ed7142e843fc0d3;p=jalview.git

added abbreviations
---

diff --git a/src/jalview/analysis/TreeAlgorithm.java b/src/jalview/analysis/TreeAlgorithm.java
new file mode 100644
index 0000000..55175f2
--- /dev/null
+++ b/src/jalview/analysis/TreeAlgorithm.java
@@ -0,0 +1,14 @@
+package jalview.analysis;
+
+public enum TreeAlgorithm
+{
+  NEIGHBOUR_JOINING("NJ"), AVERAGE_DISTANCE("AV"), MAXIMUM_PARSIMONY("MP"),
+  MAXIMUM_LIKELIHOOD("ML"), BAYESIAN("BY");
+
+  private final String abbreviation;
+
+  TreeAlgorithm(String abbreviatedAlgorithm)
+  {
+    this.abbreviation = abbreviatedAlgorithm;
+  }
+}
diff --git a/src/jalview/analysis/TreeAlgorithms.java b/src/jalview/analysis/TreeAlgorithms.java
deleted file mode 100644
index b3ebbdc..0000000
--- a/src/jalview/analysis/TreeAlgorithms.java
+++ /dev/null
@@ -1,7 +0,0 @@
-package jalview.analysis;
-
-public enum TreeAlgorithms
-{
-  NEIGHBOUR_JOINING, AVERAGE_DISTANCE, MAXIMUM_PARSIMONY,
-  MAXIMUM_LIKELIHOOD, BAYESIAN
-}