From: Sasha Sherstnev <a.sherstnev@dundee.ac.uk>
Date: Mon, 14 Oct 2013 09:56:14 +0000 (+0100)
Subject: Remove difinition of UNIREF for JABAWS from jpred.pl
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=cf438c5ee78c0c5f42dc2ee7b35f84d842601f79;p=jabaws.git

Remove difinition of UNIREF for JABAWS from jpred.pl
---

diff --git a/binaries/src/jpred/jpred.pl b/binaries/src/jpred/jpred.pl
index 436ae63..99d7fdc 100755
--- a/binaries/src/jpred/jpred.pl
+++ b/binaries/src/jpred/jpred.pl
@@ -68,7 +68,7 @@ The option untoggles this step and stops jpred at the concise file generation
 
 =item -jabaws
 
-Redefined basic variable in order to use the script within JABAWS
+Redefines some basic variables in order to use the script within JABAWS
 
 =item -verbose
 
@@ -226,11 +226,6 @@ $goal = "seq" if ( defined $seqgoal );
 
 #####################################################################################################
 # Key to database information and information for accessing them
-if ( defined $jabaws ) {
-  $db_path  = "/homes/www-jpred/databases";
-  $db_entry = "cluster";
-}
-
 my $database = {
 
   ## default database used by Jpred