From: jprocter Date: Mon, 14 Jun 2010 11:21:34 +0000 (+0000) Subject: patch for JAL-572 X-Git-Tag: Release_2_6~181 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=d46053ba40ebbaf5a8b8867cdc770673228b4721;p=jalview.git patch for JAL-572 --- diff --git a/src/jalview/io/StockholmFile.java b/src/jalview/io/StockholmFile.java index 764a3d4..b407463 100644 --- a/src/jalview/io/StockholmFile.java +++ b/src/jalview/io/StockholmFile.java @@ -98,7 +98,7 @@ public class StockholmFile extends AlignFile } // We define some Regexes here that will be used regularily later - rend = new Regex("\\/\\/"); // Find the end of an alignment + rend = new Regex("^\\s*\\/\\/"); // Find the end of an alignment p = new Regex("(\\S+)\\/(\\d+)\\-(\\d+)"); // split sequence id in // id/from/to s = new Regex("(\\S+)\\s+(\\S*)\\s+(.*)"); // Parses annotation subtype