From: Renia Correya <rcorreya001@dundee.ac.uk>
Date: Wed, 24 Jul 2024 15:54:17 +0000 (+0100)
Subject: JAL-4392 Adding secondary structure provider Adding secondary structure
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=d46506c4ddd13830bf09a5f6fbad223e80d0eff2;p=jalview.git

JAL-4392 Adding secondary structure provider Adding secondary structure
provider in parenthesis for each secondary structure annotation.
---

diff --git a/src/jalview/gui/AnnotationLabels.java b/src/jalview/gui/AnnotationLabels.java
index 35ffbf3..d7b950b 100755
--- a/src/jalview/gui/AnnotationLabels.java
+++ b/src/jalview/gui/AnnotationLabels.java
@@ -1493,6 +1493,12 @@ public class AnnotationLabels extends JPanel
             vertBar = true;
           }
         }
+        
+        if(Constants.SECONDARY_STRUCTURE_LABELS.keySet().contains(aa[i].label)) {
+          String ssSource = AlignmentUtils.extractSSSourceFromAnnotationDescription(aa[i]);
+          if(ssSource != null && ssSource.length()>0)
+          label += " (" + ssSource + ")";
+        }
 
         int labelWidth = fm.stringWidth(label) + 3;
         x = width - labelWidth;